Merged master

38 files changed, 1171 insertions, 215 deletions

diff --git a/avr/boards.txt b/avr/boards.txt
index af2ad8e..85a9bf3 100644
--- a/avr/boards.txt
+++ b/avr/boards.txt
@@ -7,10 +7,15 @@ uno.upload.tool=avrdude
 uno.upload.protocol=arduino
 uno.upload.maximum_size=32256
 uno.upload.speed=115200
+
 uno.bootloader.tool=avrdude
-uno.bootloader.erase.params=-e -Ulock:w:0x3F:m -Uefuse:w:0x05:m -Uhfuse:w:0xde:m -Ulfuse:w:0xff:m
-uno.bootloader.write.params=-Uflash:w:{bootloader.file}:i -Ulock:w:0x0F:m
-uno.bootloader.file={runtime.ide.path}/hardware/arduino/avr/optiboot/optiboot_atmega328.hex
+uno.bootloader.low_fuses=0xFF
+uno.bootloader.high_fuses=0xDE
+uno.bootloader.extended_fuses=0x05
+uno.bootloader.unlock_bits=0x3F
+uno.bootloader.lock_bits=0x0F
+uno.bootloader.file=optiboot/optiboot_atmega328.hex
+
 uno.build.mcu=atmega328p
 uno.build.f_cpu=16000000L
 uno.build.core=arduino
@@ -145,23 +150,28 @@ mega.build.variant=mega
 ##############################################################
 
 leonardo.name=Arduino Leonardo
+leonardo.upload.tool=avrdude
 leonardo.upload.protocol=avr109
 leonardo.upload.maximum_size=28672
 leonardo.upload.speed=57600
 leonardo.upload.disable_flushing=true
+leonardo.upload.use_1200bps_touch=true
+
+leonardo.bootloader.tool=avrdude
 leonardo.bootloader.low_fuses=0xff
 leonardo.bootloader.high_fuses=0xd8
 leonardo.bootloader.extended_fuses=0xcb
-leonardo.bootloader.path=caterina
-leonardo.bootloader.file=Caterina-Leonardo.hex
+leonardo.bootloader.file=caterina/Caterina-Leonardo.hex
 leonardo.bootloader.unlock_bits=0x3F
 leonardo.bootloader.lock_bits=0x2F
+
 leonardo.build.mcu=atmega32u4
 leonardo.build.f_cpu=16000000L
 leonardo.build.vid=0x2341
 leonardo.build.pid=0x8036
 leonardo.build.core=arduino
 leonardo.build.variant=leonardo
+leonardo.build.extra_flags=-DUSB_VID={build.vid} -DUSB_PID={build.pid}
 
 ##############################################################
 
diff --git a/avr/cores/arduino/Arduino.h b/avr/cores/arduino/Arduino.h
index bfec943..830c995 100755
--- a/avr/cores/arduino/Arduino.h
+++ b/avr/cores/arduino/Arduino.h
@@ -20,6 +20,7 @@ extern "C"{
 
 #define INPUT 0x0
 #define OUTPUT 0x1
+#define INPUT_PULLUP 0x2
 
 #define true 0x1
 #define false 0x0
diff --git a/avr/cores/arduino/CDC.cpp b/avr/cores/arduino/CDC.cpp
index 14a0eae..1ee3a48 100644
--- a/avr/cores/arduino/CDC.cpp
+++ b/avr/cores/arduino/CDC.cpp
@@ -23,12 +23,20 @@
 #if defined(USBCON)
 #ifdef CDC_ENABLED
 
-void Reboot()
+#if (RAMEND < 1000)
+#define SERIAL_BUFFER_SIZE 16
+#else
+#define SERIAL_BUFFER_SIZE 64
+#endif
+
+struct ring_buffer
 {
-	USB.detach();
-	cli();
-	asm volatile("jmp 0x7800");		// jump to bootloader - DiskLoader takes up last 2 kB
-}
+	unsigned char buffer[SERIAL_BUFFER_SIZE];
+	volatile int head;
+	volatile int tail;
+};
+
+ring_buffer cdc_rx_buffer = { { 0 }, 0, 0};
 
 typedef struct
 {
@@ -92,9 +100,28 @@ bool WEAK CDC_Setup(Setup& setup)
 
 		if (CDC_SET_CONTROL_LINE_STATE == r)
 		{
-			if (0 != _usbLineInfo.lineState && 1200 == _usbLineInfo.dwDTERate)	// auto-reset is triggered when the port, already open at 1200 bps, is closed
-				Reboot();
 			_usbLineInfo.lineState = setup.wValueL;
+
+			// auto-reset into the bootloader is triggered when the port, already 
+			// open at 1200 bps, is closed.  this is the signal to start the watchdog
+			// with a relatively long period so it can finish housekeeping tasks
+			// like servicing endpoints before the sketch ends
+			if (1200 == _usbLineInfo.dwDTERate) {
+				// We check DTR state to determine if host port is open (bit 0 of lineState).
+				if ((_usbLineInfo.lineState & 0x01) == 0) {
+					*(uint16_t *)0x0800 = 0x7777;
+					wdt_enable(WDTO_120MS);
+				} else {
+					// Most OSs do some intermediate steps when configuring ports and DTR can
+					// twiggle more than once before stabilizing.
+					// To avoid spurious resets we set the watchdog to 250ms and eventually
+					// cancel if DTR goes back high.
+	
+					wdt_disable();
+					wdt_reset();
+					*(uint16_t *)0x0800 = 0x0;
+				}
+			}
 			return true;
 		}
 	}
@@ -111,33 +138,49 @@ void Serial_::end(void)
 {
 }
 
+void Serial_::accept(void) 
+{
+	ring_buffer *buffer = &cdc_rx_buffer;
+	int c = USB_Recv(CDC_RX); 
+	int i = (unsigned int)(buffer->head+1) % SERIAL_BUFFER_SIZE;
+	
+	// if we should be storing the received character into the location
+	// just before the tail (meaning that the head would advance to the
+	// current location of the tail), we're about to overflow the buffer
+	// and so we don't write the character or advance the head.
+	if (i != buffer->tail) {
+		buffer->buffer[buffer->head] = c;
+		buffer->head = i;
+	}
+}
+
 int Serial_::available(void)
 {
-	u8 avail = USB_Available(CDC_RX);
-	if (_serialPeek != -1)
-		avail++;
-	return avail;
+	ring_buffer *buffer = &cdc_rx_buffer;
+	return (unsigned int)(SERIAL_BUFFER_SIZE + buffer->head - buffer->tail) % SERIAL_BUFFER_SIZE;
 }
 
-//	peek is nasty
 int Serial_::peek(void)
 {
-	if (_serialPeek == -1)
-		_serialPeek = read();
-	return _serialPeek;
+	ring_buffer *buffer = &cdc_rx_buffer;
+	if (buffer->head == buffer->tail) {
+		return -1;
+	} else {
+		return buffer->buffer[buffer->tail];
+	}
 }
 
 int Serial_::read(void)
 {
-	int c;
-	if (_serialPeek != -1)
-	{
-		c = _serialPeek;
-		_serialPeek = -1;
+	ring_buffer *buffer = &cdc_rx_buffer;
+	// if the head isn't ahead of the tail, we don't have any characters
+	if (buffer->head == buffer->tail) {
+		return -1;
 	} else {
-		c = USB_Recv(CDC_RX);
-	}
-	return c;
+		unsigned char c = buffer->buffer[buffer->tail];
+		buffer->tail = (unsigned int)(buffer->tail + 1) % SERIAL_BUFFER_SIZE;
+		return c;
+	}	
 }
 
 void Serial_::flush(void)
@@ -169,7 +212,22 @@ size_t Serial_::write(uint8_t c)
 	return 0;
 }
 
+// This operator is a convenient way for a sketch to check whether the
+// port has actually been configured and opened by the host (as opposed
+// to just being connected to the host).  It can be used, for example, in 
+// setup() before printing to ensure that an application on the host is
+// actually ready to receive and display the data.
+// We add a short delay before returning to fix a bug observed by Federico
+// where the port is configured (lineState != 0) but not quite opened.
+Serial_::operator bool() {
+	bool result = false;
+	if (_usbLineInfo.lineState > 0) 
+		result = true;
+	delay(10);
+	return result;
+}
+
 Serial_ Serial;
 
 #endif
-#endif /* if defined(USBCON) */
\ No newline at end of file
+#endif /* if defined(USBCON) */
diff --git a/avr/cores/arduino/HID.cpp b/avr/cores/arduino/HID.cpp
index 8ed1566..ac63608 100644
--- a/avr/cores/arduino/HID.cpp
+++ b/avr/cores/arduino/HID.cpp
@@ -144,7 +144,6 @@ u8 _hid_protocol = 1;
 u8 _hid_idle = 1;
 
 #define WEAK __attribute__ ((weak))
-#define WEAK 
 
 int WEAK HID_GetInterface(u8* interfaceNum)
 {
@@ -202,7 +201,15 @@ bool WEAK HID_Setup(Setup& setup)
 //================================================================================
 //	Mouse
 
-Mouse_::Mouse_() : _buttons(0)
+Mouse_::Mouse_(void) : _buttons(0)
+{
+}
+
+void Mouse_::begin(void) 
+{
+}
+
+void Mouse_::end(void) 
 {
 }
 
@@ -245,7 +252,7 @@ void Mouse_::release(uint8_t b)
 
 bool Mouse_::isPressed(uint8_t b)
 {
-	if (b & _buttons > 0) 
+	if ((b & _buttons) > 0) 
 		return true;
 	return false;
 }
@@ -254,18 +261,21 @@ bool Mouse_::isPressed(uint8_t b)
 //================================================================================
 //	Keyboard
 
-Keyboard_::Keyboard_() : _keyMap(0)
+Keyboard_::Keyboard_(void) 
 {
 }
 
-void Keyboard_::sendReport(KeyReport* keys)
+void Keyboard_::begin(void) 
+{
+}
+
+void Keyboard_::end(void) 
 {
-	HID_SendReport(2,keys,sizeof(KeyReport));
 }
 
-void Keyboard_::setKeyMap(KeyMap* keyMap)
+void Keyboard_::sendReport(KeyReport* keys)
 {
-	_keyMap = keyMap;
+	HID_SendReport(2,keys,sizeof(KeyReport));
 }
 
 extern
@@ -406,41 +416,105 @@ const uint8_t _asciimap[128] =
 };
 
 uint8_t USBPutChar(uint8_t c);
-size_t Keyboard_::write(uint8_t c)
+
+// press() adds the specified key (printing, non-printing, or modifier)
+// to the persistent key report and sends the report.  Because of the way 
+// USB HID works, the host acts like the key remains pressed until we 
+// call release(), releaseAll(), or otherwise clear the report and resend.
+size_t Keyboard_::press(uint8_t k) 
 {
-	// Keydown
-	{
-		KeyReport keys = {0};
-		if (_keyMap)
-			_keyMap->charToKey(c,&keys);
-		else
-		{
-			if (c >= 128) {
-				setWriteError();
-				return 0;
-			}
-			c = pgm_read_byte(_asciimap + c);
-			if (!c) {
-				setWriteError();
-				return 0;
-			}
-			if (c & 0x80)
-			{
-				keys.modifiers |= KEY_MODIFIER_LEFT_SHIFT;
-				c &= 0x7F;
+	uint8_t i;
+	if (k >= 136) {			// it's a non-printing key (not a modifier)
+		k = k - 136;
+	} else if (k >= 128) {	// it's a modifier key
+		_keyReport.modifiers |= (1<<(k-128));
+		k = 0;
+	} else {				// it's a printing key
+		k = pgm_read_byte(_asciimap + k);
+		if (!k) {
+			setWriteError();
+			return 0;
+		}
+		if (k & 0x80) {						// it's a capital letter or other character reached with shift
+			_keyReport.modifiers |= 0x02;	// the left shift modifier
+			k &= 0x7F;
+		}
+	}
+	
+	// Add k to the key report only if it's not already present
+	// and if there is an empty slot.
+	if (_keyReport.keys[0] != k && _keyReport.keys[1] != k && 
+		_keyReport.keys[2] != k && _keyReport.keys[3] != k &&
+		_keyReport.keys[4] != k && _keyReport.keys[5] != k) {
+		
+		for (i=0; i<6; i++) {
+			if (_keyReport.keys[i] == 0x00) {
+				_keyReport.keys[i] = k;
+				break;
 			}
-			keys.keys[0] = c;
 		}
-		sendReport(&keys);
+		if (i == 6) {
+			setWriteError();
+			return 0;
+		}	
 	}
-	//	Keyup
-	{
-		KeyReport keys = {0};
-		sendReport(&keys);
+	sendReport(&_keyReport);
+	return 1;
+}
+
+// release() takes the specified key out of the persistent key report and
+// sends the report.  This tells the OS the key is no longer pressed and that
+// it shouldn't be repeated any more.
+size_t Keyboard_::release(uint8_t k) 
+{
+	uint8_t i;
+	if (k >= 136) {			// it's a non-printing key (not a modifier)
+		k = k - 136;
+	} else if (k >= 128) {	// it's a modifier key
+		_keyReport.modifiers &= ~(1<<(k-128));
+		k = 0;
+	} else {				// it's a printing key
+		k = pgm_read_byte(_asciimap + k);
+		if (!k) {
+			return 0;
+		}
+		if (k & 0x80) {							// it's a capital letter or other character reached with shift
+			_keyReport.modifiers &= ~(0x02);	// the left shift modifier
+			k &= 0x7F;
+		}
 	}
+	
+	// Test the key report to see if k is present.  Clear it if it exists.
+	// Check all positions in case the key is present more than once (which it shouldn't be)
+	for (i=0; i<6; i++) {
+		if (0 != k && _keyReport.keys[i] == k) {
+			_keyReport.keys[i] = 0x00;
+		}
+	}
+
+	sendReport(&_keyReport);
 	return 1;
 }
 
+void Keyboard_::releaseAll(void)
+{
+	_keyReport.keys[0] = 0;
+	_keyReport.keys[1] = 0;	
+	_keyReport.keys[2] = 0;
+	_keyReport.keys[3] = 0;	
+	_keyReport.keys[4] = 0;
+	_keyReport.keys[5] = 0;	
+	_keyReport.modifiers = 0;
+	sendReport(&_keyReport);
+}
+
+size_t Keyboard_::write(uint8_t c)
+{	
+	uint8_t p = press(c);		// Keydown
+	uint8_t r = release(c);		// Keyup
+	return (p);					// just return the result of press() since release() almost always returns 1
+}
+
 #endif
 
 #endif /* if defined(USBCON) */
\ No newline at end of file
diff --git a/avr/cores/arduino/HardwareSerial.cpp b/avr/cores/arduino/HardwareSerial.cpp
index 1b1fa71..f40ddee 100644
--- a/avr/cores/arduino/HardwareSerial.cpp
+++ b/avr/cores/arduino/HardwareSerial.cpp
@@ -46,8 +46,8 @@
 struct ring_buffer
 {
   unsigned char buffer[SERIAL_BUFFER_SIZE];
-  volatile int head;
-  volatile int tail;
+  volatile unsigned int head;
+  volatile unsigned int tail;
 };
 
 #if defined(USBCON)
@@ -398,6 +398,10 @@ size_t HardwareSerial::write(uint8_t c)
   return 1;
 }
 
+HardwareSerial::operator bool() {
+	return true;
+}
+
 // Preinstantiate Objects //////////////////////////////////////////////////////
 
 #if defined(UBRRH) && defined(UBRRL)
diff --git a/avr/cores/arduino/HardwareSerial.h b/avr/cores/arduino/HardwareSerial.h
index 176abe1..bf4924c 100644
--- a/avr/cores/arduino/HardwareSerial.h
+++ b/avr/cores/arduino/HardwareSerial.h
@@ -57,6 +57,7 @@ class HardwareSerial : public Stream
     virtual void flush(void);
     virtual size_t write(uint8_t);
     using Print::write; // pull in write(str) and write(buf, size) from Print
+    operator bool();
 };
 
 #if defined(UBRRH) || defined(UBRR0H)
diff --git a/avr/cores/arduino/Print.cpp b/avr/cores/arduino/Print.cpp
index ff9b154..711251c 100755
--- a/avr/cores/arduino/Print.cpp
+++ b/avr/cores/arduino/Print.cpp
@@ -41,7 +41,7 @@ size_t Print::write(const uint8_t *buffer, size_t size)
 
 size_t Print::print(const __FlashStringHelper *ifsh)
 {
-  const prog_char *p = (const prog_char *)ifsh;
+  const char PROGMEM *p = (const char PROGMEM *)ifsh;
   size_t n = 0;
   while (1) {
     unsigned char c = pgm_read_byte(p++);
@@ -226,6 +226,9 @@ size_t Print::printFloat(double number, uint8_t digits)
 { 
   size_t n = 0;
   
+  if (isnan(number)) return print("nan");
+  if (isinf(number)) return print("inf");
+  
   // Handle negative numbers
   if (number < 0.0)
   {
diff --git a/avr/cores/arduino/Print.h b/avr/cores/arduino/Print.h
index 1af6b72..dc76150 100755
--- a/avr/cores/arduino/Print.h
+++ b/avr/cores/arduino/Print.h
@@ -46,7 +46,10 @@ class Print
     void clearWriteError() { setWriteError(0); }
   
     virtual size_t write(uint8_t) = 0;
-    size_t write(const char *str) { return write((const uint8_t *)str, strlen(str)); }
+    size_t write(const char *str) {
+      if (str == NULL) return 0;
+      return write((const uint8_t *)str, strlen(str));
+    }
     virtual size_t write(const uint8_t *buffer, size_t size);
     
     size_t print(const __FlashStringHelper *);
diff --git a/avr/cores/arduino/Stream.cpp b/avr/cores/arduino/Stream.cpp
index 5fad8dd..aafb7fc 100644
--- a/avr/cores/arduino/Stream.cpp
+++ b/avr/cores/arduino/Stream.cpp
@@ -99,25 +99,27 @@ bool Stream::findUntil(char *target, size_t targetLen, char *terminator, size_t
   size_t index = 0;  // maximum target string length is 64k bytes!
   size_t termIndex = 0;
   int c;
-
+  
   if( *target == 0)
-     return true;   // return true if target is a null string
+    return true;   // return true if target is a null string
   while( (c = timedRead()) > 0){
+    
+    if(c != target[index])
+      index = 0; // reset index if any char does not match
+    
     if( c == target[index]){
-    //////Serial.print("found "); Serial.write(c); Serial.print("index now"); Serial.println(index+1);
+      //////Serial.print("found "); Serial.write(c); Serial.print("index now"); Serial.println(index+1);
       if(++index >= targetLen){ // return true if all chars in the target match
         return true;
       }
     }
-    else{
-      index = 0;  // reset index if any char does not match
-    }
+    
     if(termLen > 0 && c == terminator[termIndex]){
-       if(++termIndex >= termLen)
-         return false;       // return false if terminate string found before target string
+      if(++termIndex >= termLen)
+        return false;       // return false if terminate string found before target string
     }
     else
-        termIndex = 0;
+      termIndex = 0;
   }
   return false;
 }
@@ -242,3 +244,27 @@ size_t Stream::readBytesUntil(char terminator, char *buffer, size_t length)
   return index; // return number of characters, not including null terminator
 }
 
+String Stream::readString()
+{
+  String ret;
+  int c = timedRead();
+  while (c >= 0)
+  {
+    ret += (char)c;
+    c = timedRead();
+  }
+  return ret;
+}
+
+String Stream::readStringUntil(char terminator)
+{
+  String ret;
+  int c = timedRead();
+  while (c >= 0 && c != terminator)
+  {
+    ret += (char)c;
+    c = timedRead();
+  }
+  return ret;
+}
+
diff --git a/avr/cores/arduino/Stream.h b/avr/cores/arduino/Stream.h
index 13f11be..58bbf75 100644
--- a/avr/cores/arduino/Stream.h
+++ b/avr/cores/arduino/Stream.h
@@ -82,6 +82,8 @@ class Stream : public Print
   // returns the number of characters placed in the buffer (0 means no valid data found)
 
   // Arduino String functions to be added here
+  String readString();
+  String readStringUntil(char terminator);
 
   protected:
   long parseInt(char skipChar); // as above but the given skipChar is ignored
diff --git a/avr/cores/arduino/USBAPI.h b/avr/cores/arduino/USBAPI.h
index 26a2032..eb2e593 100644
--- a/avr/cores/arduino/USBAPI.h
+++ b/avr/cores/arduino/USBAPI.h
@@ -9,17 +9,17 @@
 //================================================================================
 //	USB
 
-class USB_
+class USBDevice_
 {
 public:
-	USB_();
+	USBDevice_();
 	bool configured();
 
 	void attach();
 	void detach();	// Serial port goes down too...
 	void poll();
 };
-extern USB_ USB;
+extern USBDevice_ USBDevice;
 
 //================================================================================
 //================================================================================
@@ -27,15 +27,20 @@ extern USB_ USB;
 
 class Serial_ : public Stream
 {
+private:
+	ring_buffer *_cdc_rx_buffer;
 public:
 	void begin(uint16_t baud_count);
 	void end(void);
 
 	virtual int available(void);
+	virtual void accept(void);
 	virtual int peek(void);
 	virtual int read(void);
 	virtual void flush(void);
 	virtual size_t write(uint8_t);
+	using Print::write; // pull in write(str) and write(buf, size) from Print
+	operator bool();
 };
 extern Serial_ Serial;
 
@@ -54,12 +59,14 @@ private:
 	uint8_t _buttons;
 	void buttons(uint8_t b);
 public:
-	Mouse_();
+	Mouse_(void);
+	void begin(void);
+	void end(void);
 	void click(uint8_t b = MOUSE_LEFT);
 	void move(signed char x, signed char y, signed char wheel = 0);	
 	void press(uint8_t b = MOUSE_LEFT);		// press LEFT by default
 	void release(uint8_t b = MOUSE_LEFT);	// release LEFT by default
-	bool isPressed(uint8_t b = MOUSE_ALL);	// check all buttons by default
+	bool isPressed(uint8_t b = MOUSE_LEFT);	// check LEFT by default
 };
 extern Mouse_ Mouse;
 
@@ -67,14 +74,42 @@ extern Mouse_ Mouse;
 //================================================================================
 //	Keyboard
 
-#define KEY_MODIFIER_LEFT_CTRL		0x01
-#define KEY_MODIFIER_LEFT_SHIFT		0x02
-#define KEY_MODIFIER_LEFT_ALT		0x04
-#define KEY_MODIFIER_LEFT_GUI		0x08
-#define KEY_MODIFIER_RIGHT_CTRL		0x010
-#define KEY_MODIFIER_RIGHT_SHIFT	0x020
-#define KEY_MODIFIER_RIGHT_ALT		0x040
-#define KEY_MODIFIER_RIGHT_GUI		0x080
+#define KEY_LEFT_CTRL		0x80
+#define KEY_LEFT_SHIFT		0x81
+#define KEY_LEFT_ALT		0x82
+#define KEY_LEFT_GUI		0x83
+#define KEY_RIGHT_CTRL		0x84
+#define KEY_RIGHT_SHIFT		0x85
+#define KEY_RIGHT_ALT		0x86
+#define KEY_RIGHT_GUI		0x87
+
+#define KEY_UP_ARROW		0xDA
+#define KEY_DOWN_ARROW		0xD9
+#define KEY_LEFT_ARROW		0xD8
+#define KEY_RIGHT_ARROW		0xD7
+#define KEY_BACKSPACE		0xB2
+#define KEY_TAB				0xB3
+#define KEY_RETURN			0xB0
+#define KEY_ESC				0xB1
+#define KEY_INSERT			0xD1
+#define KEY_DELETE			0xD4
+#define KEY_PAGE_UP			0xD3
+#define KEY_PAGE_DOWN		0xD6
+#define KEY_HOME			0xD2
+#define KEY_END				0xD5
+#define KEY_CAPS_LOCK		0xC1
+#define KEY_F1				0xC2
+#define KEY_F2				0xC3
+#define KEY_F3				0xC4
+#define KEY_F4				0xC5
+#define KEY_F5				0xC6
+#define KEY_F6				0xC7
+#define KEY_F7				0xC8
+#define KEY_F8				0xC9
+#define KEY_F9				0xCA
+#define KEY_F10				0xCB
+#define KEY_F11				0xCC
+#define KEY_F12				0xCD
 
 //	Low level key report: up to 6 keys and shift, ctrl etc at once
 typedef struct
@@ -84,24 +119,19 @@ typedef struct
 	uint8_t keys[6];
 } KeyReport;
 
-//	Map a character into a key report
-//	Called from Print to map text to keycodes
-class KeyMap
-{
-public:
-	virtual void charToKey(int c, KeyReport* keyReport) = 0;
-};
-
-//	
 class Keyboard_ : public Print
 {
 private:
-	KeyMap* _keyMap;
+	KeyReport _keyReport;
 	void sendReport(KeyReport* keys);
-	void setKeyMap(KeyMap* keyMap);	
 public:
-	Keyboard_();
-	virtual size_t write(uint8_t);
+	Keyboard_(void);
+	void begin(void);
+	void end(void);
+	virtual size_t write(uint8_t k);
+	virtual size_t press(uint8_t k);
+	virtual size_t release(uint8_t k);
+	virtual void releaseAll(void);
 };
 extern Keyboard_ Keyboard;
 
diff --git a/avr/cores/arduino/USBCore.cpp b/avr/cores/arduino/USBCore.cpp
index 4c71b34..6766be6 100644
--- a/avr/cores/arduino/USBCore.cpp
+++ b/avr/cores/arduino/USBCore.cpp
@@ -51,16 +51,20 @@ const u16 STRING_LANGUAGE[2] = {
 
 const u16 STRING_IPRODUCT[17] = {
 	(3<<8) | (2+2*16),
-#if USB_PID == USB_PID_LEONARDO	
+#if USB_PID == 0x8036	
 	'A','r','d','u','i','n','o',' ','L','e','o','n','a','r','d','o'
-#elif USB_PID == USB_PID_MICRO
-	'A','r','d','u','i','n','o',' ','M','i','c','r','o',' ',' ',' '
+#else
+	'U','S','B',' ','I','O',' ','B','o','a','r','d',' ',' ',' ',' '
 #endif
 };
 
 const u16 STRING_IMANUFACTURER[12] = {
 	(3<<8) | (2+2*11),
+#if USB_VID == 0x2341
 	'A','r','d','u','i','n','o',' ','L','L','C'
+#else
+	'U','n','k','n','o','w','n',' ',' ',' ',' '
+#endif
 };
 
 #ifdef CDC_ENABLED
@@ -230,7 +234,7 @@ int USB_Recv(u8 ep, void* d, int len)
 	n = len;
 	u8* dst = (u8*)d;
 	while (n--)
-		*dst++ = USBD_Recv8();
+		*dst++ = Recv8();
 	if (len && !FifoByteCount())	// release empty buffer
 		ReleaseRX();
 	
@@ -599,6 +603,8 @@ ISR(USB_GEN_vect)
 	{
 #ifdef CDC_ENABLED
 		USB_Flush(CDC_TX);				// Send a tx frame if found
+		while (USB_Available(CDC_RX))	// Handle received bytes (if any)
+			Serial.accept();
 #endif
 		
 		// check whether the one-shot period has elapsed.  if so, turn off the LED
@@ -621,13 +627,13 @@ u8 USBConnected()
 //=======================================================================
 //=======================================================================
 
-USB_ USB;
+USBDevice_ USBDevice;
 
-USB_::USB_()
+USBDevice_::USBDevice_()
 {
 }
 
-void USB_::attach()
+void USBDevice_::attach()
 {
 	_usbConfiguration = 0;
 	UHWCON = 0x01;						// power internal reg
@@ -635,6 +641,12 @@ void USB_::attach()
 	PLLCSR = 0x12;						// Need 16 MHz xtal
 	while (!(PLLCSR & (1<<PLOCK)))		// wait for lock pll
 		;
+
+	// Some tests on specific versions of macosx (10.7.3), reported some
+	// strange behaviuors when the board is reset using the serial
+	// port touch at 1200 bps. This delay fixes this behaviour.
+	delay(1);
+
 	USBCON = ((1<<USBE)|(1<<OTGPADE));	// start USB clock
 	UDIEN = (1<<EORSTE)|(1<<SOFE);		// Enable interrupts for EOR (End of Reset) and SOF (start of frame)
 	UDCON = 0;							// enable attach resistor
@@ -642,19 +654,19 @@ void USB_::attach()
 	TX_RX_LED_INIT;
 }
 
-void USB_::detach()
+void USBDevice_::detach()
 {
 }
 
 //	Check for interrupts
 //	TODO: VBUS detection
-bool USB_::configured()
+bool USBDevice_::configured()
 {
 	return _usbConfiguration;
 }
 
-void USB_::poll()
+void USBDevice_::poll()
 {
 }
 
-#endif /* if defined(USBCON) */
\ No newline at end of file
+#endif /* if defined(USBCON) */
diff --git a/avr/cores/arduino/USBDesc.h b/avr/cores/arduino/USBDesc.h
index 549ed9e..900713e 100644
--- a/avr/cores/arduino/USBDesc.h
+++ b/avr/cores/arduino/USBDesc.h
@@ -60,8 +60,4 @@
 
 #define IMANUFACTURER	1
 #define IPRODUCT		2
-#define USB_PID_LEONARDO 0x0034
-#define USB_PID_MICRO 0x0035
-#define USB_VID 0x2341	// arduino LLC vid
-#define USB_PID	ARDUINO_MODEL_USB_PID	
 
diff --git a/avr/cores/arduino/WInterrupts.c b/avr/cores/arduino/WInterrupts.c
index 1449cfb..62efc9c 100755..100644
--- a/avr/cores/arduino/WInterrupts.c
+++ b/avr/cores/arduino/WInterrupts.c
@@ -32,7 +32,7 @@
 
 #include "wiring_private.h"
 
-volatile static voidFuncPtr intFunc[EXTERNAL_NUM_INTERRUPTS];
+static volatile voidFuncPtr intFunc[EXTERNAL_NUM_INTERRUPTS];
 // volatile static voidFuncPtr twiIntFunc;
 
 void attachInterrupt(uint8_t interruptNum, void (*userFunc)(void), int mode) {
@@ -47,7 +47,27 @@ void attachInterrupt(uint8_t interruptNum, void (*userFunc)(void), int mode) {
     // Enable the interrupt.
       
     switch (interruptNum) {
-#if defined(EICRA) && defined(EICRB) && defined(EIMSK)
+#if defined(__AVR_ATmega32U4__)
+	// I hate doing this, but the register assignment differs between the 1280/2560
+	// and the 32U4.  Since avrlib defines registers PCMSK1 and PCMSK2 that aren't 
+	// even present on the 32U4 this is the only way to distinguish between them.
+	case 0:
+		EICRA = (EICRA & ~((1<<ISC00) | (1<<ISC01))) | (mode << ISC00);
+		EIMSK |= (1<<INT0);
+		break;
+	case 1:
+		EICRA = (EICRA & ~((1<<ISC10) | (1<<ISC11))) | (mode << ISC10);
+		EIMSK |= (1<<INT1);
+		break;	
+    case 2:
+        EICRA = (EICRA & ~((1<<ISC20) | (1<<ISC21))) | (mode << ISC20);
+        EIMSK |= (1<<INT2);
+        break;
+    case 3:
+        EICRA = (EICRA & ~((1<<ISC30) | (1<<ISC31))) | (mode << ISC30);
+        EIMSK |= (1<<INT3);
+        break;
+#elif defined(EICRA) && defined(EICRB) && defined(EIMSK)
     case 2:
       EICRA = (EICRA & ~((1 << ISC00) | (1 << ISC01))) | (mode << ISC00);
       EIMSK |= (1 << INT0);
@@ -80,7 +100,7 @@ void attachInterrupt(uint8_t interruptNum, void (*userFunc)(void), int mode) {
       EICRB = (EICRB & ~((1 << ISC70) | (1 << ISC71))) | (mode << ISC70);
       EIMSK |= (1 << INT7);
       break;
-#else
+#else		
     case 0:
     #if defined(EICRA) && defined(ISC00) && defined(EIMSK)
       EICRA = (EICRA & ~((1 << ISC00) | (1 << ISC01))) | (mode << ISC00);
@@ -121,8 +141,6 @@ void attachInterrupt(uint8_t interruptNum, void (*userFunc)(void), int mode) {
     #elif defined(MCUCR) && defined(ISC20) && defined(GIMSK) && defined(GIMSK)
       MCUCR = (MCUCR & ~((1 << ISC20) | (1 << ISC21))) | (mode << ISC20);
       GIMSK |= (1 << INT2);
-    #else
-      #warning attachInterrupt may need some more work for this cpu (case 1)
     #endif
       break;
 #endif
@@ -136,7 +154,20 @@ void detachInterrupt(uint8_t interruptNum) {
     // to the number of the EIMSK bit to clear, as this isn't true on the 
     // ATmega8.  There, INT0 is 6 and INT1 is 7.)
     switch (interruptNum) {
-#if defined(EICRA) && defined(EICRB) && defined(EIMSK)
+#if defined(__AVR_ATmega32U4__)
+    case 0:
+        EIMSK &= ~(1<<INT0);
+        break;
+    case 1:
+        EIMSK &= ~(1<<INT1);
+        break;
+    case 2:
+        EIMSK &= ~(1<<INT2);
+        break;
+    case 3:
+        EIMSK &= ~(1<<INT3);
+        break;		
+#elif defined(EICRA) && defined(EICRB) && defined(EIMSK)
     case 2:
       EIMSK &= ~(1 << INT0);
       break;
@@ -198,7 +229,28 @@ void attachInterruptTwi(void (*userFunc)(void) ) {
 }
 */
 
-#if defined(EICRA) && defined(EICRB)
+#if defined(__AVR_ATmega32U4__)
+SIGNAL(INT0_vect) {
+	if(intFunc[EXTERNAL_INT_0])
+		intFunc[EXTERNAL_INT_0]();
+}
+
+SIGNAL(INT1_vect) {
+	if(intFunc[EXTERNAL_INT_1])
+		intFunc[EXTERNAL_INT_1]();
+}
+
+SIGNAL(INT2_vect) {
+    if(intFunc[EXTERNAL_INT_2])
+		intFunc[EXTERNAL_INT_2]();
+}
+
+SIGNAL(INT3_vect) {
+    if(intFunc[EXTERNAL_INT_3])
+		intFunc[EXTERNAL_INT_3]();
+}
+
+#elif defined(EICRA) && defined(EICRB)
 
 SIGNAL(INT0_vect) {
   if(intFunc[EXTERNAL_INT_2])
diff --git a/avr/cores/arduino/WString.cpp b/avr/cores/arduino/WString.cpp
index 3e81331..c6839fc 100644
--- a/avr/cores/arduino/WString.cpp
+++ b/avr/cores/arduino/WString.cpp
@@ -500,7 +500,7 @@ int String::lastIndexOf( char theChar ) const
 
 int String::lastIndexOf(char ch, unsigned int fromIndex) const
 {
-	if (fromIndex >= len || fromIndex < 0) return -1;
+	if (fromIndex >= len) return -1;
 	char tempchar = buffer[fromIndex + 1];
 	buffer[fromIndex + 1] = '\0';
 	char* temp = strrchr( buffer, ch );
@@ -516,7 +516,7 @@ int String::lastIndexOf(const String &s2) const
 
 int String::lastIndexOf(const String &s2, unsigned int fromIndex) const
 {
-  	if (s2.len == 0 || len == 0 || s2.len > len || fromIndex < 0) return -1;
+  	if (s2.len == 0 || len == 0 || s2.len > len) return -1;
 	if (fromIndex >= len) fromIndex = len - 1;
 	int found = -1;
 	for (char *p = buffer; p <= buffer + fromIndex; p++) {
diff --git a/avr/cores/arduino/main.cpp b/avr/cores/arduino/main.cpp
index 34450f4..3d4e079 100755..100644
--- a/avr/cores/arduino/main.cpp
+++ b/avr/cores/arduino/main.cpp
@@ -5,7 +5,7 @@ int main(void)
 	init();
 
 #if defined(USBCON)
-	USB.attach();
+	USBDevice.attach();
 #endif
 	
 	setup();
diff --git a/avr/cores/arduino/wiring.c b/avr/cores/arduino/wiring.c
index e7f7cde..ac8bb6f 100755..100644
--- a/avr/cores/arduino/wiring.c
+++ b/avr/cores/arduino/wiring.c
@@ -278,12 +278,21 @@ void init()
 	sbi(TCCR3B, CS30);
 	sbi(TCCR3A, WGM30);		// put timer 3 in 8-bit phase correct pwm mode
 #endif
-	
+
+#if defined(TCCR4A) && defined(TCCR4B) && defined(TCCR4D) /* beginning of timer4 block for 32U4 and similar */
+	sbi(TCCR4B, CS42);		// set timer4 prescale factor to 64
+	sbi(TCCR4B, CS41);
+	sbi(TCCR4B, CS40);
+	sbi(TCCR4D, WGM40);		// put timer 4 in phase- and frequency-correct PWM mode	
+	sbi(TCCR4A, PWM4A);		// enable PWM mode for comparator OCR4A
+	sbi(TCCR4C, PWM4D);		// enable PWM mode for comparator OCR4D
+#else /* beginning of timer4 block for ATMEGA1280 and ATMEGA2560 */
 #if defined(TCCR4B) && defined(CS41) && defined(WGM40)
 	sbi(TCCR4B, CS41);		// set timer 4 prescale factor to 64
 	sbi(TCCR4B, CS40);
 	sbi(TCCR4A, WGM40);		// put timer 4 in 8-bit phase correct pwm mode
 #endif
+#endif /* end timer4 block for ATMEGA1280/2560 and similar */	
 
 #if defined(TCCR5B) && defined(CS51) && defined(WGM50)
 	sbi(TCCR5B, CS51);		// set timer 5 prescale factor to 64
diff --git a/avr/cores/arduino/wiring_analog.c b/avr/cores/arduino/wiring_analog.c
index 902b153..0e9881f 100644
--- a/avr/cores/arduino/wiring_analog.c
+++ b/avr/cores/arduino/wiring_analog.c
@@ -45,6 +45,8 @@ int analogRead(uint8_t pin)
 	if (pin >= 54) pin -= 54; // allow for channel or pin numbers
 #elif defined(__AVR_ATmega32U4__)
 	if (pin >= 18) pin -= 18; // allow for channel or pin numbers
+#elif defined(__AVR_ATmega1284__)
+	if (pin >= 24) pin -= 24; // allow for channel or pin numbers
 #else
 	if (pin >= 14) pin -= 14; // allow for channel or pin numbers
 #endif
@@ -204,14 +206,17 @@ void analogWrite(uint8_t pin, int val)
 				break;
 			#endif
 
-			#if defined(TCCR4A) && defined(COM4A1)
+			#if defined(TCCR4A)
 			case TIMER4A:
-				// connect pwm to pin on timer 4, channel A
+				//connect pwm to pin on timer 4, channel A
 				sbi(TCCR4A, COM4A1);
-				OCR4A = val; // set pwm duty
+				#if defined(COM4A0)		// only used on 32U4
+				cbi(TCCR4A, COM4A0);
+				#endif
+				OCR4A = val;	// set pwm duty
 				break;
 			#endif
-
+			
 			#if defined(TCCR4A) && defined(COM4B1)
 			case TIMER4B:
 				// connect pwm to pin on timer 4, channel B
@@ -228,14 +233,18 @@ void analogWrite(uint8_t pin, int val)
 				break;
 			#endif
 				
-			#if defined(TCCR4A) && defined(COM4D1)
-			case TIMER4D:
+			#if defined(TCCR4C) && defined(COM4D1)
+			case TIMER4D:				
 				// connect pwm to pin on timer 4, channel D
-				sbi(TCCR4A, COM4D1);
-				OCR4D = val; // set pwm duty
+				sbi(TCCR4C, COM4D1);
+				#if defined(COM4D0)		// only used on 32U4
+				cbi(TCCR4C, COM4D0);
+				#endif
+				OCR4D = val;	// set pwm duty
 				break;
 			#endif
 
+							
 			#if defined(TCCR5A) && defined(COM5A1)
 			case TIMER5A:
 				// connect pwm to pin on timer 5, channel A
@@ -270,3 +279,4 @@ void analogWrite(uint8_t pin, int val)
 		}
 	}
 }
+
diff --git a/avr/cores/arduino/wiring_digital.c b/avr/cores/arduino/wiring_digital.c
index 97ef134..be323b1 100755..100644
--- a/avr/cores/arduino/wiring_digital.c
+++ b/avr/cores/arduino/wiring_digital.c
@@ -32,17 +32,25 @@ void pinMode(uint8_t pin, uint8_t mode)
 {
 	uint8_t bit = digitalPinToBitMask(pin);
 	uint8_t port = digitalPinToPort(pin);
-	volatile uint8_t *reg;
+	volatile uint8_t *reg, *out;
 
 	if (port == NOT_A_PIN) return;
 
 	// JWS: can I let the optimizer do this?
 	reg = portModeRegister(port);
+	out = portOutputRegister(port);
 
 	if (mode == INPUT) { 
 		uint8_t oldSREG = SREG;
                 cli();
 		*reg &= ~bit;
+		*out &= ~bit;
+		SREG = oldSREG;
+	} else if (mode == INPUT_PULLUP) {
+		uint8_t oldSREG = SREG;
+                cli();
+		*reg &= ~bit;
+		*out |= bit;
 		SREG = oldSREG;
 	} else {
 		uint8_t oldSREG = SREG;
@@ -107,13 +115,17 @@ static void turnOffPWM(uint8_t timer)
 
 		#if defined(TCCR4A) && defined(COM4A1)
 		case  TIMER4A:  cbi(TCCR4A, COM4A1);    break;
-		#endif
+		#endif					
 		#if defined(TCCR4A) && defined(COM4B1)
 		case  TIMER4B:  cbi(TCCR4A, COM4B1);    break;
 		#endif
 		#if defined(TCCR4A) && defined(COM4C1)
 		case  TIMER4C:  cbi(TCCR4A, COM4C1);    break;
-		#endif
+		#endif			
+		#if defined(TCCR4C) && defined(COM4D1)
+		case TIMER4D:	cbi(TCCR4C, COM4D1);	break;
+		#endif			
+			
 		#if defined(TCCR5A)
 		case  TIMER5A:  cbi(TCCR5A, COM5A1);    break;
 		case  TIMER5B:  cbi(TCCR5A, COM5B1);    break;
diff --git a/avr/cores/arduino/wiring_private.h b/avr/cores/arduino/wiring_private.h
index f0ceb0c..026ce1a 100755
--- a/avr/cores/arduino/wiring_private.h
+++ b/avr/cores/arduino/wiring_private.h
@@ -56,6 +56,8 @@ extern "C"{
 #define EXTERNAL_NUM_INTERRUPTS 8
 #elif defined(__AVR_ATmega1284P__) 
 #define EXTERNAL_NUM_INTERRUPTS 3
+#elif defined(__AVR_ATmega32U4__)
+#define EXTERNAL_NUM_INTERRUPTS 4
 #else
 #define EXTERNAL_NUM_INTERRUPTS 2
 #endif
diff --git a/avr/platform.txt b/avr/platform.txt
index c47cd8b..557b2d3 100644
--- a/avr/platform.txt
+++ b/avr/platform.txt
@@ -6,12 +6,12 @@ name=Arduino
 # Default "compiler.path" is correct, change only if you want to overidde the initial value
 #compiler.path={ide.path}/tools/avr/bin/..
 compiler.c.cmd=avr-gcc
-compiler.c.flags=-c -g -Os -w -ffunction-sections -fdata-sections
+compiler.c.flags=-c -g -Os -w -ffunction-sections -fdata-sections -MMD
 compiler.c.elf.flags=-Os -Wl,--gc-sections
 compiler.c.elf.cmd=avr-gcc
 compiler.S.flags=-c -g -assembler-with-cpp
 compiler.cpp.cmd=avr-g++
-compiler.cpp.flags=-c -g -Os -w -fno-exceptions -ffunction-sections -fdata-sections
+compiler.cpp.flags=-c -g -Os -w -fno-exceptions -ffunction-sections -fdata-sections -MMD
 compiler.ar.cmd=avr-ar
 compiler.ar.flags=rcs
 compiler.objcopy.cmd=avr-objcopy
@@ -20,48 +20,56 @@ compiler.elf2hex.flags=-O ihex -R .eeprom
 compiler.elf2hex.cmd=avr-objcopy
 compiler.ldflags=
 compiler.size.cmd=avr-size
+# this can be overriden in boards.txt
+build.extra_flags=
 
 # AVR compile patterns
 # --------------------
 
 ## Compile c files
-recipe.c.o.pattern={compiler.path}{compiler.c.cmd} {compiler.c.flags} -mmcu={build.mcu} -DF_CPU={build.f_cpu} -D{software}={runtime.ide.version} {includes} {source_file} -o {object_file}
+recipe.c.o.pattern="{compiler.path}{compiler.c.cmd}" {compiler.c.flags} -mmcu={build.mcu} -DF_CPU={build.f_cpu} -D{software}={runtime.ide.version} {build.extra_flags} {includes} "{source_file}" -o "{object_file}"
 
 ## Compile c++ files
-recipe.cpp.o.pattern={compiler.path}{compiler.cpp.cmd} {compiler.cpp.flags} -mmcu={build.mcu} -DF_CPU={build.f_cpu} -D{software}={runtime.ide.version} {includes} {source_file} -o {object_file}
+recipe.cpp.o.pattern="{compiler.path}{compiler.cpp.cmd}" {compiler.cpp.flags} -mmcu={build.mcu} -DF_CPU={build.f_cpu} -D{software}={runtime.ide.version} {build.extra_flags} {includes} "{source_file}" -o "{object_file}"
 
 ## Create archives
-recipe.ar.pattern={compiler.path}{compiler.ar.cmd} {compiler.ar.flags} {build.path}/{archive_file} {object_file}
+recipe.ar.pattern="{compiler.path}{compiler.ar.cmd}" {compiler.ar.flags} "{build.path}/{archive_file}" "{object_file}"
 
 ## Combine gc-sections, archives, and objects
-recipe.c.combine.pattern={compiler.path}{compiler.c.elf.cmd} {compiler.c.elf.flags} -mmcu={build.mcu} -o {build.path}/{build.project_name}.elf {object_files} {build.path}/{archive_file} -L{build.path} -lm
+recipe.c.combine.pattern="{compiler.path}{compiler.c.elf.cmd}" {compiler.c.elf.flags} -mmcu={build.mcu} -o "{build.path}/{build.project_name}.elf" {object_files} "{build.path}/{archive_file}" "-L{build.path}" -lm
 
 ## Create eeprom
-recipe.objcopy.eep.pattern={compiler.path}{compiler.objcopy.cmd} {compiler.objcopy.eep.flags} {build.path}/{build.project_name}.elf {build.path}/{build.project_name}.eep
+recipe.objcopy.eep.pattern="{compiler.path}{compiler.objcopy.cmd}" {compiler.objcopy.eep.flags} "{build.path}/{build.project_name}.elf" "{build.path}/{build.project_name}.eep"
 
 ## Create hex
-recipe.objcopy.hex.pattern={compiler.path}{compiler.elf2hex.cmd} {compiler.elf2hex.flags} {build.path}/{build.project_name}.elf {build.path}/{build.project_name}.hex
+recipe.objcopy.hex.pattern="{compiler.path}{compiler.elf2hex.cmd}" {compiler.elf2hex.flags} "{build.path}/{build.project_name}.elf" "{build.path}/{build.project_name}.hex"
 
 ## Compute size
-recipe.size.pattern={compiler.path}{compiler.size.cmd} -A {build.path}/{build.project_name}.hex
+recipe.size.pattern="{compiler.path}{compiler.size.cmd}" -A "{build.path}/{build.project_name}.hex"
 recipe.size.regex=Total\s+([0-9]+).*
 
 
 # AVR Uploader/Programmers tools
 # -------------------
 
-tools.avrdude.cmd=avrdude
-tools.avrdude.path={runtime.ide.path}/hardware/tools
-tools.avrdude.config.path={path}/avrdude.conf
+tools.avrdude.cmd.path={runtime.ide.path}/hardware/tools/avr/bin/avrdude
+tools.avrdude.config.path={runtime.ide.path}/hardware/tools/avr/etc/avrdude.conf
+tools.avrdude.cmd.path.linux={runtime.ide.path}/hardware/tools/avrdude
+tools.avrdude.config.path.linux={runtime.ide.path}/hardware/tools/avrdude.conf
 
 tools.avrdude.upload.params.verbose=-v -v -v -v
 tools.avrdude.upload.params.quiet=-q -q
-tools.avrdude.upload.pattern={path}/{cmd} -C{config.path} {upload.verbose} -p{build.mcu} -c{upload.protocol} -P{serial.port} -b{upload.speed} -D -Uflash:w:{build.path}/{build.project_name}.hex:i
+tools.avrdude.upload.pattern="{cmd.path}" "-C{config.path}" {upload.verbose} -p{build.mcu} -c{upload.protocol} -P{serial.port} -b{upload.speed} -D "-Uflash:w:{build.path}/{build.project_name}.hex:i"
 
 tools.avrdude.program.params.verbose=-v -v -v -v
 tools.avrdude.program.params.quiet=-q -q
-tools.avrdude.program.pattern={path}/{cmd} -C{config.path} {program.verbose} -p{build.mcu} -c{protocol} {program.extra_params} -Uflash:w:{build.path}/{build.project_name}.hex:i
+tools.avrdude.program.pattern="{cmd.path}" "-C{config.path}" {program.verbose} -p{build.mcu} -c{protocol} {program.extra_params} "-Uflash:w:{build.path}/{build.project_name}.hex:i"
+
+tools.avrdude.erase.params.verbose=-v -v -v -v
+tools.avrdude.erase.params.quiet=-q -q
+tools.avrdude.erase.pattern="{cmd.path}" "-C{config.path}" {erase.verbose} -p{build.mcu} -c{protocol} {program.extra_params} -e -Ulock:w:{bootloader.unlock_bits}:m -Uefuse:w:{bootloader.extended_fuses}:m -Uhfuse:w:{bootloader.high_fuses}:m -Ulfuse:w:{bootloader.low_fuses}:m
 
 tools.avrdude.bootloader.params.verbose=-v -v -v -v
 tools.avrdude.bootloader.params.quiet=-q -q
-tools.avrdude.bootloader.pattern={path}/{cmd} -C{config.path} {bootloader.verbose} -p{build.mcu} -c{protocol} {program.extra_params} {bootloader.params}
+tools.avrdude.bootloader.pattern="{cmd.path}" "-C{config.path}" {bootloader.verbose} -p{build.mcu} -c{protocol} {program.extra_params} "-Uflash:w:{runtime.ide.path}/hardware/arduino/avr/bootloaders/{bootloader.file}:i" -Ulock:w:{bootloader.lock_bits}:m
+
diff --git a/sam/cores/arduino/Client.h b/sam/cores/arduino/Client.h
new file mode 100644
index 0000000..ea13483
--- /dev/null
+++ b/sam/cores/arduino/Client.h
@@ -0,0 +1,26 @@
+#ifndef client_h
+#define client_h
+#include "Print.h"
+#include "Stream.h"
+#include "IPAddress.h"
+
+class Client : public Stream {
+
+public:
+  virtual int connect(IPAddress ip, uint16_t port) =0;
+  virtual int connect(const char *host, uint16_t port) =0;
+  virtual size_t write(uint8_t) =0;
+  virtual size_t write(const uint8_t *buf, size_t size) =0;
+  virtual int available() = 0;
+  virtual int read() = 0;
+  virtual int read(uint8_t *buf, size_t size) = 0;
+  virtual int peek() = 0;
+  virtual void flush() = 0;
+  virtual void stop() = 0;
+  virtual uint8_t connected() = 0;
+  virtual operator bool() = 0;
+protected:
+  uint8_t* rawIPAddress(IPAddress& addr) { return addr.raw_address(); };
+};
+
+#endif
diff --git a/sam/cores/arduino/IPAddress.cpp b/sam/cores/arduino/IPAddress.cpp
new file mode 100644
index 0000000..fe3deb7
--- /dev/null
+++ b/sam/cores/arduino/IPAddress.cpp
@@ -0,0 +1,56 @@
+
+#include <Arduino.h>
+#include <IPAddress.h>
+
+IPAddress::IPAddress()
+{
+    memset(_address, 0, sizeof(_address));
+}
+
+IPAddress::IPAddress(uint8_t first_octet, uint8_t second_octet, uint8_t third_octet, uint8_t fourth_octet)
+{
+    _address[0] = first_octet;
+    _address[1] = second_octet;
+    _address[2] = third_octet;
+    _address[3] = fourth_octet;
+}
+
+IPAddress::IPAddress(uint32_t address)
+{
+    memcpy(_address, &address, sizeof(_address));
+}
+
+IPAddress::IPAddress(const uint8_t *address)
+{
+    memcpy(_address, address, sizeof(_address));
+}
+
+IPAddress& IPAddress::operator=(const uint8_t *address)
+{
+    memcpy(_address, address, sizeof(_address));
+    return *this;
+}
+
+IPAddress& IPAddress::operator=(uint32_t address)
+{
+    memcpy(_address, (const uint8_t *)&address, sizeof(_address));
+    return *this;
+}
+
+bool IPAddress::operator==(const uint8_t* addr)
+{
+    return memcmp(addr, _address, sizeof(_address)) == 0;
+}
+
+size_t IPAddress::printTo(Print& p) const
+{
+    size_t n = 0;
+    for (int i =0; i < 3; i++)
+    {
+        n += p.print(_address[i], DEC);
+        n += p.print('.');
+    }
+    n += p.print(_address[3], DEC);
+    return n;
+}
+
diff --git a/sam/cores/arduino/IPAddress.h b/sam/cores/arduino/IPAddress.h
new file mode 100644
index 0000000..2585aec
--- /dev/null
+++ b/sam/cores/arduino/IPAddress.h
@@ -0,0 +1,76 @@
+/*
+ *
+ * MIT License:
+ * Copyright (c) 2011 Adrian McEwen
+ * Permission is hereby granted, free of charge, to any person obtaining a copy
+ * of this software and associated documentation files (the "Software"), to deal
+ * in the Software without restriction, including without limitation the rights
+ * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+ * copies of the Software, and to permit persons to whom the Software is
+ * furnished to do so, subject to the following conditions:
+ * 
+ * The above copyright notice and this permission notice shall be included in
+ * all copies or substantial portions of the Software.
+ * 
+ * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+ * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+ * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+ * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+ * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+ * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
+ * THE SOFTWARE.
+ *
+ * adrianm@mcqn.com 1/1/2011
+ */
+
+#ifndef IPAddress_h
+#define IPAddress_h
+
+#include <Printable.h>
+
+// A class to make it easier to handle and pass around IP addresses
+
+class IPAddress : public Printable {
+private:
+    uint8_t _address[4];  // IPv4 address
+    // Access the raw byte array containing the address.  Because this returns a pointer
+    // to the internal structure rather than a copy of the address this function should only
+    // be used when you know that the usage of the returned uint8_t* will be transient and not
+    // stored.
+    uint8_t* raw_address() { return _address; };
+
+public:
+    // Constructors
+    IPAddress();
+    IPAddress(uint8_t first_octet, uint8_t second_octet, uint8_t third_octet, uint8_t fourth_octet);
+    IPAddress(uint32_t address);
+    IPAddress(const uint8_t *address);
+
+    // Overloaded cast operator to allow IPAddress objects to be used where a pointer
+    // to a four-byte uint8_t array is expected
+    operator uint32_t() { return *((uint32_t*)_address); };
+    bool operator==(const IPAddress& addr) { return (*((uint32_t*)_address)) == (*((uint32_t*)addr._address)); };
+    bool operator==(const uint8_t* addr);
+
+    // Overloaded index operator to allow getting and setting individual octets of the address
+    uint8_t operator[](int index) const { return _address[index]; };
+    uint8_t& operator[](int index) { return _address[index]; };
+
+    // Overloaded copy operators to allow initialisation of IPAddress objects from other types
+    IPAddress& operator=(const uint8_t *address);
+    IPAddress& operator=(uint32_t address);
+
+    virtual size_t printTo(Print& p) const;
+
+    friend class EthernetClass;
+    friend class UDP;
+    friend class Client;
+    friend class Server;
+    friend class DhcpClass;
+    friend class DNSClient;
+};
+
+const IPAddress INADDR_NONE(0,0,0,0);
+
+
+#endif
diff --git a/sam/cores/arduino/Print.cpp b/sam/cores/arduino/Print.cpp
index 123370f..4a21176 100644
--- a/sam/cores/arduino/Print.cpp
+++ b/sam/cores/arduino/Print.cpp
@@ -219,6 +219,9 @@ size_t Print::printFloat(double number, uint8_t digits)
 { 
   size_t n = 0;
   
+  if (isnan(number)) return print("nan");
+  if (isinf(number)) return print("inf");
+  
   // Handle negative numbers
   if (number < 0.0)
   {
diff --git a/sam/cores/arduino/Print.h b/sam/cores/arduino/Print.h
index 1af6b72..dc76150 100644
--- a/sam/cores/arduino/Print.h
+++ b/sam/cores/arduino/Print.h
@@ -46,7 +46,10 @@ class Print
     void clearWriteError() { setWriteError(0); }
   
     virtual size_t write(uint8_t) = 0;
-    size_t write(const char *str) { return write((const uint8_t *)str, strlen(str)); }
+    size_t write(const char *str) {
+      if (str == NULL) return 0;
+      return write((const uint8_t *)str, strlen(str));
+    }
     virtual size_t write(const uint8_t *buffer, size_t size);
     
     size_t print(const __FlashStringHelper *);
diff --git a/sam/cores/arduino/Server.h b/sam/cores/arduino/Server.h
new file mode 100644
index 0000000..9674c76
--- /dev/null
+++ b/sam/cores/arduino/Server.h
@@ -0,0 +1,9 @@
+#ifndef server_h
+#define server_h
+
+class Server : public Print {
+public:
+  virtual void begin() =0;
+};
+
+#endif
diff --git a/sam/cores/arduino/Stream.cpp b/sam/cores/arduino/Stream.cpp
new file mode 100644
index 0000000..aafb7fc
--- /dev/null
+++ b/sam/cores/arduino/Stream.cpp
@@ -0,0 +1,270 @@
+/*
+ Stream.cpp - adds parsing methods to Stream class
+ Copyright (c) 2008 David A. Mellis.  All right reserved.
+
+ This library is free software; you can redistribute it and/or
+ modify it under the terms of the GNU Lesser General Public
+ License as published by the Free Software Foundation; either
+ version 2.1 of the License, or (at your option) any later version.
+
+ This library is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+ Lesser General Public License for more details.
+
+ You should have received a copy of the GNU Lesser General Public
+ License along with this library; if not, write to the Free Software
+ Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301  USA
+
+ Created July 2011
+ parsing functions based on TextFinder library by Michael Margolis
+ */
+
+#include "Arduino.h"
+#include "Stream.h"
+
+#define PARSE_TIMEOUT 1000  // default number of milli-seconds to wait
+#define NO_SKIP_CHAR  1  // a magic char not found in a valid ASCII numeric field
+
+// private method to read stream with timeout
+int Stream::timedRead()
+{
+  int c;
+  _startMillis = millis();
+  do {
+    c = read();
+    if (c >= 0) return c;
+  } while(millis() - _startMillis < _timeout);
+  return -1;     // -1 indicates timeout
+}
+
+// private method to peek stream with timeout
+int Stream::timedPeek()
+{
+  int c;
+  _startMillis = millis();
+  do {
+    c = peek();
+    if (c >= 0) return c;
+  } while(millis() - _startMillis < _timeout);
+  return -1;     // -1 indicates timeout
+}
+
+// returns peek of the next digit in the stream or -1 if timeout
+// discards non-numeric characters
+int Stream::peekNextDigit()
+{
+  int c;
+  while (1) {
+    c = timedPeek();
+    if (c < 0) return c;  // timeout
+    if (c == '-') return c;
+    if (c >= '0' && c <= '9') return c;
+    read();  // discard non-numeric
+  }
+}
+
+// Public Methods
+//////////////////////////////////////////////////////////////
+
+void Stream::setTimeout(unsigned long timeout)  // sets the maximum number of milliseconds to wait
+{
+  _timeout = timeout;
+}
+
+ // find returns true if the target string is found
+bool  Stream::find(char *target)
+{
+  return findUntil(target, NULL);
+}
+
+// reads data from the stream until the target string of given length is found
+// returns true if target string is found, false if timed out
+bool Stream::find(char *target, size_t length)
+{
+  return findUntil(target, length, NULL, 0);
+}
+
+// as find but search ends if the terminator string is found
+bool  Stream::findUntil(char *target, char *terminator)
+{
+  return findUntil(target, strlen(target), terminator, strlen(terminator));
+}
+
+// reads data from the stream until the target string of the given length is found
+// search terminated if the terminator string is found
+// returns true if target string is found, false if terminated or timed out
+bool Stream::findUntil(char *target, size_t targetLen, char *terminator, size_t termLen)
+{
+  size_t index = 0;  // maximum target string length is 64k bytes!
+  size_t termIndex = 0;
+  int c;
+  
+  if( *target == 0)
+    return true;   // return true if target is a null string
+  while( (c = timedRead()) > 0){
+    
+    if(c != target[index])
+      index = 0; // reset index if any char does not match
+    
+    if( c == target[index]){
+      //////Serial.print("found "); Serial.write(c); Serial.print("index now"); Serial.println(index+1);
+      if(++index >= targetLen){ // return true if all chars in the target match
+        return true;
+      }
+    }
+    
+    if(termLen > 0 && c == terminator[termIndex]){
+      if(++termIndex >= termLen)
+        return false;       // return false if terminate string found before target string
+    }
+    else
+      termIndex = 0;
+  }
+  return false;
+}
+
+
+// returns the first valid (long) integer value from the current position.
+// initial characters that are not digits (or the minus sign) are skipped
+// function is terminated by the first character that is not a digit.
+long Stream::parseInt()
+{
+  return parseInt(NO_SKIP_CHAR); // terminate on first non-digit character (or timeout)
+}
+
+// as above but a given skipChar is ignored
+// this allows format characters (typically commas) in values to be ignored
+long Stream::parseInt(char skipChar)
+{
+  boolean isNegative = false;
+  long value = 0;
+  int c;
+
+  c = peekNextDigit();
+  // ignore non numeric leading characters
+  if(c < 0)
+    return 0; // zero returned if timeout
+
+  do{
+    if(c == skipChar)
+      ; // ignore this charactor
+    else if(c == '-')
+      isNegative = true;
+    else if(c >= '0' && c <= '9')        // is c a digit?
+      value = value * 10 + c - '0';
+    read();  // consume the character we got with peek
+    c = timedPeek();
+  }
+  while( (c >= '0' && c <= '9') || c == skipChar );
+
+  if(isNegative)
+    value = -value;
+  return value;
+}
+
+
+// as parseInt but returns a floating point value
+float Stream::parseFloat()
+{
+  return parseFloat(NO_SKIP_CHAR);
+}
+
+// as above but the given skipChar is ignored
+// this allows format characters (typically commas) in values to be ignored
+float Stream::parseFloat(char skipChar){
+  boolean isNegative = false;
+  boolean isFraction = false;
+  long value = 0;
+  char c;
+  float fraction = 1.0;
+
+  c = peekNextDigit();
+    // ignore non numeric leading characters
+  if(c < 0)
+    return 0; // zero returned if timeout
+
+  do{
+    if(c == skipChar)
+      ; // ignore
+    else if(c == '-')
+      isNegative = true;
+    else if (c == '.')
+      isFraction = true;
+    else if(c >= '0' && c <= '9')  {      // is c a digit?
+      value = value * 10 + c - '0';
+      if(isFraction)
+         fraction *= 0.1;
+    }
+    read();  // consume the character we got with peek
+    c = timedPeek();
+  }
+  while( (c >= '0' && c <= '9')  || c == '.' || c == skipChar );
+
+  if(isNegative)
+    value = -value;
+  if(isFraction)
+    return value * fraction;
+  else
+    return value;
+}
+
+// read characters from stream into buffer
+// terminates if length characters have been read, or timeout (see setTimeout)
+// returns the number of characters placed in the buffer
+// the buffer is NOT null terminated.
+//
+size_t Stream::readBytes(char *buffer, size_t length)
+{
+  size_t count = 0;
+  while (count < length) {
+    int c = timedRead();
+    if (c < 0) break;
+    *buffer++ = (char)c;
+    count++;
+  }
+  return count;
+}
+
+
+// as readBytes with terminator character
+// terminates if length characters have been read, timeout, or if the terminator character  detected
+// returns the number of characters placed in the buffer (0 means no valid data found)
+
+size_t Stream::readBytesUntil(char terminator, char *buffer, size_t length)
+{
+  if (length < 1) return 0;
+  size_t index = 0;
+  while (index < length) {
+    int c = timedRead();
+    if (c < 0 || c == terminator) break;
+    *buffer++ = (char)c;
+    index++;
+  }
+  return index; // return number of characters, not including null terminator
+}
+
+String Stream::readString()
+{
+  String ret;
+  int c = timedRead();
+  while (c >= 0)
+  {
+    ret += (char)c;
+    c = timedRead();
+  }
+  return ret;
+}
+
+String Stream::readStringUntil(char terminator)
+{
+  String ret;
+  int c = timedRead();
+  while (c >= 0 && c != terminator)
+  {
+    ret += (char)c;
+    c = timedRead();
+  }
+  return ret;
+}
+
diff --git a/sam/cores/arduino/Stream.h b/sam/cores/arduino/Stream.h
index aaa189f..58bbf75 100644
--- a/sam/cores/arduino/Stream.h
+++ b/sam/cores/arduino/Stream.h
@@ -15,21 +15,82 @@
   You should have received a copy of the GNU Lesser General Public
   License along with this library; if not, write to the Free Software
   Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301  USA
+
+  parsing functions based on TextFinder library by Michael Margolis
 */
 
 #ifndef Stream_h
 #define Stream_h
 
-#include <stdint.h>
+#include <inttypes.h>
 #include "Print.h"
 
+// compatability macros for testing
+/*
+#define   getInt()            parseInt()
+#define   getInt(skipChar)    parseInt(skipchar)
+#define   getFloat()          parseFloat()
+#define   getFloat(skipChar)  parseFloat(skipChar)
+#define   getString( pre_string, post_string, buffer, length)
+readBytesBetween( pre_string, terminator, buffer, length)
+*/
+
 class Stream : public Print
 {
+  private:
+    unsigned long _timeout;      // number of milliseconds to wait for the next char before aborting timed read
+    unsigned long _startMillis;  // used for timeout measurement
+    int timedRead();    // private method to read stream with timeout
+    int timedPeek();    // private method to peek stream with timeout
+    int peekNextDigit(); // returns the next numeric digit in the stream or -1 if timeout
+
   public:
     virtual int available() = 0;
     virtual int read() = 0;
     virtual int peek() = 0;
     virtual void flush() = 0;
+
+    Stream() {_timeout=1000;}
+
+// parsing methods
+
+  void setTimeout(unsigned long timeout);  // sets maximum milliseconds to wait for stream data, default is 1 second
+
+  bool find(char *target);   // reads data from the stream until the target string is found
+  // returns true if target string is found, false if timed out (see setTimeout)
+
+  bool find(char *target, size_t length);   // reads data from the stream until the target string of given length is found
+  // returns true if target string is found, false if timed out
+
+  bool findUntil(char *target, char *terminator);   // as find but search ends if the terminator string is found
+
+  bool findUntil(char *target, size_t targetLen, char *terminate, size_t termLen);   // as above but search ends if the terminate string is found
+
+
+  long parseInt(); // returns the first valid (long) integer value from the current position.
+  // initial characters that are not digits (or the minus sign) are skipped
+  // integer is terminated by the first character that is not a digit.
+
+  float parseFloat();               // float version of parseInt
+
+  size_t readBytes( char *buffer, size_t length); // read chars from stream into buffer
+  // terminates if length characters have been read or timeout (see setTimeout)
+  // returns the number of characters placed in the buffer (0 means no valid data found)
+
+  size_t readBytesUntil( char terminator, char *buffer, size_t length); // as readBytes with terminator character
+  // terminates if length characters have been read, timeout, or if the terminator character  detected
+  // returns the number of characters placed in the buffer (0 means no valid data found)
+
+  // Arduino String functions to be added here
+  String readString();
+  String readStringUntil(char terminator);
+
+  protected:
+  long parseInt(char skipChar); // as above but the given skipChar is ignored
+  // as above but the given skipChar is ignored
+  // this allows format characters (typically commas) in values to be ignored
+
+  float parseFloat(char skipChar);  // as above but the given skipChar is ignored
 };
 
 #endif
diff --git a/sam/cores/arduino/USB/USBAPI.h b/sam/cores/arduino/USB/USBAPI.h
index 592d3a0..de98895 100644
--- a/sam/cores/arduino/USB/USBAPI.h
+++ b/sam/cores/arduino/USB/USBAPI.h
@@ -27,17 +27,17 @@
 //================================================================================
 //	USB
 
-class USB_
+class USBDevice_
 {
 public:
-	USB_();
+	USBDevice_();
 	bool configured();
 
 	bool attach();
 	bool detach();	// Serial port goes down too...
 	void poll();
 };
-extern USB_ USB;
+extern USBDevice_ USBDevice;
 
 //================================================================================
 //================================================================================
@@ -57,6 +57,7 @@ public:
 	virtual int read(void);
 	virtual void flush(void);
 	virtual size_t write(uint8_t);
+	using Print::write; // pull in write(str) and write(buf, size) from Print
 	operator bool();
 };
 extern Serial_ Serial;
diff --git a/sam/cores/arduino/USB/USBCore.cpp b/sam/cores/arduino/USB/USBCore.cpp
index 77eaee1..3b4a2ce 100644
--- a/sam/cores/arduino/USB/USBCore.cpp
+++ b/sam/cores/arduino/USB/USBCore.cpp
@@ -536,9 +536,9 @@ uint32_t USBD_Connected(void)
 //=======================================================================
 //=======================================================================
 
-USB_ USB;
+USBDevice_ USBDevice;
 
-USB_::USB_()
+USBDevice_::USBDevice_()
 {
 	UDD_SetStack(&USB_ISR);
 
@@ -548,7 +548,7 @@ USB_::USB_()
 	}
 }
 
-bool USB_::attach(void)
+bool USBDevice_::attach(void)
 {
   if (_usbInitialized != 0UL)
   {
@@ -562,7 +562,7 @@ bool USB_::attach(void)
   }
 }
 
-bool USB_::detach(void)
+bool USBDevice_::detach(void)
 {
 	if (_usbInitialized != 0UL)
 	{
@@ -577,11 +577,11 @@ bool USB_::detach(void)
 
 //	Check for interrupts
 //	TODO: VBUS detection
-bool USB_::configured()
+bool USBDevice_::configured()
 {
 	return _usbConfiguration;
 }
 
-void USB_::poll()
+void USBDevice_::poll()
 {
 }
diff --git a/sam/cores/arduino/Udp.h b/sam/cores/arduino/Udp.h
new file mode 100644
index 0000000..dc5644b
--- /dev/null
+++ b/sam/cores/arduino/Udp.h
@@ -0,0 +1,88 @@
+/*
+ *  Udp.cpp: Library to send/receive UDP packets.
+ *
+ * NOTE: UDP is fast, but has some important limitations (thanks to Warren Gray for mentioning these)
+ * 1) UDP does not guarantee the order in which assembled UDP packets are received. This
+ * might not happen often in practice, but in larger network topologies, a UDP
+ * packet can be received out of sequence. 
+ * 2) UDP does not guard against lost packets - so packets *can* disappear without the sender being
+ * aware of it. Again, this may not be a concern in practice on small local networks.
+ * For more information, see http://www.cafeaulait.org/course/week12/35.html
+ *
+ * MIT License:
+ * Copyright (c) 2008 Bjoern Hartmann
+ * Permission is hereby granted, free of charge, to any person obtaining a copy
+ * of this software and associated documentation files (the "Software"), to deal
+ * in the Software without restriction, including without limitation the rights
+ * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+ * copies of the Software, and to permit persons to whom the Software is
+ * furnished to do so, subject to the following conditions:
+ * 
+ * The above copyright notice and this permission notice shall be included in
+ * all copies or substantial portions of the Software.
+ * 
+ * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+ * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+ * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+ * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+ * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+ * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
+ * THE SOFTWARE.
+ *
+ * bjoern@cs.stanford.edu 12/30/2008
+ */
+
+#ifndef udp_h
+#define udp_h
+
+#include <Stream.h>
+#include <IPAddress.h>
+
+class UDP : public Stream {
+
+public:
+  virtual uint8_t begin(uint16_t) =0;	// initialize, start listening on specified port. Returns 1 if successful, 0 if there are no sockets available to use
+  virtual void stop() =0;  // Finish with the UDP socket
+
+  // Sending UDP packets
+  
+  // Start building up a packet to send to the remote host specific in ip and port
+  // Returns 1 if successful, 0 if there was a problem with the supplied IP address or port
+  virtual int beginPacket(IPAddress ip, uint16_t port) =0;
+  // Start building up a packet to send to the remote host specific in host and port
+  // Returns 1 if successful, 0 if there was a problem resolving the hostname or port
+  virtual int beginPacket(const char *host, uint16_t port) =0;
+  // Finish off this packet and send it
+  // Returns 1 if the packet was sent successfully, 0 if there was an error
+  virtual int endPacket() =0;
+  // Write a single byte into the packet
+  virtual size_t write(uint8_t) =0;
+  // Write size bytes from buffer into the packet
+  virtual size_t write(const uint8_t *buffer, size_t size) =0;
+
+  // Start processing the next available incoming packet
+  // Returns the size of the packet in bytes, or 0 if no packets are available
+  virtual int parsePacket() =0;
+  // Number of bytes remaining in the current packet
+  virtual int available() =0;
+  // Read a single byte from the current packet
+  virtual int read() =0;
+  // Read up to len bytes from the current packet and place them into buffer
+  // Returns the number of bytes read, or 0 if none are available
+  virtual int read(unsigned char* buffer, size_t len) =0;
+  // Read up to len characters from the current packet and place them into buffer
+  // Returns the number of characters read, or 0 if none are available
+  virtual int read(char* buffer, size_t len) =0;
+  // Return the next byte from the current packet without moving on to the next byte
+  virtual int peek() =0;
+  virtual void flush() =0;	// Finish reading the current packet
+
+  // Return the IP address of the host who sent the current incoming packet
+  virtual IPAddress remoteIP() =0;
+  // Return the port of the host who sent the current incoming packet
+  virtual uint16_t remotePort() =0;
+protected:
+  uint8_t* rawIPAddress(IPAddress& addr) { return addr.raw_address(); };
+};
+
+#endif
diff --git a/sam/cores/arduino/main.cpp b/sam/cores/arduino/main.cpp
index 69f25f2..f28b6fd 100644
--- a/sam/cores/arduino/main.cpp
+++ b/sam/cores/arduino/main.cpp
@@ -39,13 +39,16 @@ int main( void )
 
 	delay(1);
 
-	USB.attach();
+#if defined(USBCON)
+	USBDevice.attach();
+#endif
 
 	setup();
 
 	for (;;)
 	{
 		loop();
+		if (serialEventRun) serialEventRun();
 	}
 
 	return 0;
diff --git a/sam/cores/arduino/wiring_analog.c b/sam/cores/arduino/wiring_analog.c
index 0cdc789..d5bf6dd 100644
--- a/sam/cores/arduino/wiring_analog.c
+++ b/sam/cores/arduino/wiring_analog.c
@@ -91,7 +91,7 @@ uint32_t analogRead(uint32_t ulPin)
 				;
 
 			// Read the value
-			ulValue = adc12b_get_latest_value(ADC12B);
+			ulValue = adc12b_get_latest_value(ADC12B) >> 2;
 
       // Stop the ADC12B
       //      adc12_stop( ADC12B ) ; // never do adc12_stop() else we have to reconfigure the ADC12B each time
@@ -135,7 +135,7 @@ uint32_t analogRead(uint32_t ulPin)
 				;
 
 			// Read the value
-			ulValue = adc_get_latest_value(ADC);
+			ulValue = adc_get_latest_value(ADC) >> 2;
 
 			// Disable the corresponding channel
 			adc_disable_channel(ADC, ulChannel);
@@ -151,24 +151,34 @@ uint32_t analogRead(uint32_t ulPin)
 	return ulValue;
 }
 
-static void TC_SetRA(Tc *tc, uint32_t chan, uint32_t v )
+static void TC_SetRA(Tc *tc, uint32_t chan, uint32_t v)
 {
     tc->TC_CHANNEL[chan].TC_RA = v;
 }
 
-static void TC_SetRB(Tc *tc, uint32_t chan, uint32_t v )
+static void TC_SetRB(Tc *tc, uint32_t chan, uint32_t v)
 {
     tc->TC_CHANNEL[chan].TC_RB = v;
 }
 
-static void TC_SetRC(Tc *tc, uint32_t chan, uint32_t v )
+static void TC_SetRC(Tc *tc, uint32_t chan, uint32_t v)
 {
     tc->TC_CHANNEL[chan].TC_RC = v;
 }
 
+static void TC_SetCMR_ChannelA(Tc *tc, uint32_t chan, uint32_t v)
+{
+	tc->TC_CHANNEL[chan].TC_CMR = (tc->TC_CHANNEL[chan].TC_CMR & 0xFFF0FFFF) | v;
+}
+
+static void TC_SetCMR_ChannelB(Tc *tc, uint32_t chan, uint32_t v)
+{
+	tc->TC_CHANNEL[chan].TC_CMR = (tc->TC_CHANNEL[chan].TC_CMR & 0xF0FFFFFF) | v;
+}
+
 static uint8_t PWMEnabled = 0;
 static uint8_t pinEnabled[PINS_COUNT];
-static uint8_t TCChanEnabled[] = {0, 0, 0};
+static uint8_t TCChanEnabled[] = {0, 0, 0, 0, 0, 0, 0, 0, 0};
 
 void analogOutputInit(void) {
 	uint8_t i;
@@ -254,38 +264,52 @@ void analogWrite(uint32_t ulPin, uint32_t ulValue) {
 	}
 
 	if ((attr & PIN_ATTR_TIMER) == PIN_ATTR_TIMER) {
-		// We use MCLK/2 => 96Mhz/2 => 48Mhz as clock.
-		// To get 1KHz we should use 48000 as TC
-		// 48Mhz/48000 = 1KHz
+		// We use MCLK/2 as clock.
 		const uint32_t TC = VARIANT_MCK / 2 / TC_FREQUENCY;
 
-		// Map value to Timer ranges 0..255=>0..48000
+		// Map value to Timer ranges 0..255 => 0..TC
 		ulValue = ulValue * TC;
 		ulValue = ulValue / TC_MAX_DUTY_CYCLE;
 
 		// Setup Timer for this pin
 		ETCChannel channel = g_APinDescription[ulPin].ulTCChannel;
-		static const uint32_t channelToChNo[] = { 0, 0, 1, 1, 2, 2 };
-		static const uint32_t channelToAB[] = { 1, 0, 1, 0, 1, 0 };
+		static const uint32_t channelToChNo[] = { 0, 0, 1, 1, 2, 2, 0, 0, 1, 1, 2, 2, 0, 0, 1, 1, 2, 2 };
+		static const uint32_t channelToAB[]   = { 1, 0, 1, 0, 1, 0, 1, 0, 1, 0, 1, 0, 1, 0, 1, 0, 1, 0 };
+		static const Tc *channelToTC[] = {
+			TC0, TC0, TC0, TC0, TC0, TC0,
+			TC1, TC1, TC1, TC1, TC1, TC1,
+			TC2, TC2, TC2, TC2, TC2, TC2 };
+		static const uint32_t channelToId[] = { 0, 0, 1, 1, 2, 2, 3, 3, 4, 4, 5, 5, 6, 6, 7, 7, 8, 8 };
 		uint32_t chNo = channelToChNo[channel];
-		uint32_t chA = channelToAB[channel];
-
-		if (!TCChanEnabled[chNo]) {
-			pmc_enable_periph_clk(TC_INTERFACE_ID + chNo);
-			TC_Configure(TC_INTERFACE, chNo,
-					TC_CMR_TCCLKS_TIMER_CLOCK1 |
-					TC_CMR_WAVE |
-					TC_CMR_WAVSEL_UP_RC |
-					TC_CMR_ACPA_CLEAR |   // RA Compare Effect on OA: clear
-					TC_CMR_ACPC_SET |     // RC Compare Effect on OA: set
-					TC_CMR_BCPB_CLEAR |   // RB Compare Effect on OB: clear
-					TC_CMR_BCPC_SET);     // RC Compare Effect on OB: set
-			TC_SetRC(TC_INTERFACE, chNo, TC);
+		uint32_t chA  = channelToAB[channel];
+		Tc *chTC = channelToTC[channel];
+		uint32_t interfaceID = channelToId[channel];
+
+		if (!TCChanEnabled[interfaceID]) {
+			pmc_enable_periph_clk(TC_INTERFACE_ID + interfaceID);
+			TC_Configure(chTC, chNo,
+				TC_CMR_TCCLKS_TIMER_CLOCK1 |
+				TC_CMR_WAVE |         // Waveform mode
+				TC_CMR_WAVSEL_UP_RC | // Counter running up and reset when equals to RC
+				TC_CMR_EEVT_XC0 |     // Set external events from XC0 (this setup TIOB as output)
+				TC_CMR_ACPA_CLEAR | TC_CMR_ACPC_CLEAR |
+				TC_CMR_BCPB_CLEAR | TC_CMR_BCPC_CLEAR);
+			TC_SetRC(chTC, chNo, TC);
+		}
+		if (ulValue == 0) {
+			if (chA)
+				TC_SetCMR_ChannelA(chTC, chNo, TC_CMR_ACPA_CLEAR | TC_CMR_ACPC_CLEAR);
+			else
+				TC_SetCMR_ChannelB(chTC, chNo, TC_CMR_BCPB_CLEAR | TC_CMR_BCPC_CLEAR);
+		} else {
+			if (chA) {
+				TC_SetRA(chTC, chNo, ulValue);
+				TC_SetCMR_ChannelA(chTC, chNo, TC_CMR_ACPA_CLEAR | TC_CMR_ACPC_SET);
+			} else {
+				TC_SetRB(chTC, chNo, ulValue);
+				TC_SetCMR_ChannelB(chTC, chNo, TC_CMR_BCPB_CLEAR | TC_CMR_BCPC_SET);
+			}
 		}
-		if (chA)
-			TC_SetRA(TC_INTERFACE, chNo, ulValue);
-		else
-			TC_SetRB(TC_INTERFACE, chNo, ulValue);
 		if (!pinEnabled[ulPin]) {
 			PIO_Configure(g_APinDescription[ulPin].pPort,
 					g_APinDescription[ulPin].ulPinType,
@@ -293,14 +317,14 @@ void analogWrite(uint32_t ulPin, uint32_t ulValue) {
 					g_APinDescription[ulPin].ulPinConfiguration);
 			pinEnabled[ulPin] = 1;
 		}
-		if (!TCChanEnabled[chNo]) {
-			TC_Start(TC_INTERFACE, chNo);
-			TCChanEnabled[chNo] = 1;
+		if (!TCChanEnabled[interfaceID]) {
+			TC_Start(chTC, chNo);
+			TCChanEnabled[interfaceID] = 1;
 		}
 		return;
 	}
 
-	// Default to digital write
+	// Defaults to digital write
 	pinMode(ulPin, OUTPUT);
 	if (ulValue < 128)
 		digitalWrite(ulPin, LOW);
diff --git a/sam/cores/arduino/wiring_constants.h b/sam/cores/arduino/wiring_constants.h
index 0555d71..868d46d 100644
--- a/sam/cores/arduino/wiring_constants.h
+++ b/sam/cores/arduino/wiring_constants.h
@@ -28,6 +28,7 @@ extern "C"{
 
 #define INPUT 0x0
 #define OUTPUT 0x1
+#define INPUT_PULLUP 0x2
 
 #define true 0x1
 #define false 0x0
diff --git a/sam/cores/arduino/wiring_digital.c b/sam/cores/arduino/wiring_digital.c
index bbd940d..ac6eb18 100644
--- a/sam/cores/arduino/wiring_digital.c
+++ b/sam/cores/arduino/wiring_digital.c
@@ -34,16 +34,35 @@ extern void pinMode( uint32_t ulPin, uint32_t ulMode )
         case INPUT:
             /* Enable peripheral for clocking input */
             pmc_enable_periph_clk( g_APinDescription[ulPin].ulPeripheralId ) ;
-            PIO_Configure( g_APinDescription[ulPin].pPort, PIO_INPUT, g_APinDescription[ulPin].ulPin, 0 ) ;
+            PIO_Configure(
+            	g_APinDescription[ulPin].pPort,
+            	PIO_INPUT,
+            	g_APinDescription[ulPin].ulPin,
+            	0 ) ;
+        break ;
+
+        case INPUT_PULLUP:
+            /* Enable peripheral for clocking input */
+            pmc_enable_periph_clk( g_APinDescription[ulPin].ulPeripheralId ) ;
+            PIO_Configure(
+            	g_APinDescription[ulPin].pPort,
+            	PIO_INPUT,
+            	g_APinDescription[ulPin].ulPin,
+            	PIO_PULLUP ) ;
         break ;
 
         case OUTPUT:
-            /* if all pins are output, disable PIO Controller clocking, reduce power consomption */
+            PIO_Configure(
+            	g_APinDescription[ulPin].pPort,
+            	PIO_OUTPUT_1,
+            	g_APinDescription[ulPin].ulPin,
+            	g_APinDescription[ulPin].ulPinConfiguration ) ;
+
+            /* if all pins are output, disable PIO Controller clocking, reduce power consumption */
             if ( g_APinDescription[ulPin].pPort->PIO_OSR == 0xffffffff )
             {
                 pmc_disable_periph_clk( g_APinDescription[ulPin].ulPeripheralId ) ;
             }
-            PIO_Configure( g_APinDescription[ulPin].pPort, PIO_OUTPUT_1, g_APinDescription[ulPin].ulPin, g_APinDescription[ulPin].ulPinConfiguration ) ;
         break ;
 
         default:
diff --git a/sam/cores/arduino/wiring_shift.c b/sam/cores/arduino/wiring_shift.c
index 30d3f43..302f0b5 100644
--- a/sam/cores/arduino/wiring_shift.c
+++ b/sam/cores/arduino/wiring_shift.c
@@ -22,7 +22,7 @@
 extern "C"{
 #endif
 
-extern uint32_t shiftIn( uint32_t ulDataPin, uint32_t ulClockPin, uint32_t ulBitOrder )
+uint32_t shiftIn( uint32_t ulDataPin, uint32_t ulClockPin, uint32_t ulBitOrder )
 {
 	uint8_t value = 0 ;
 	uint8_t i ;
@@ -46,7 +46,7 @@ extern uint32_t shiftIn( uint32_t ulDataPin, uint32_t ulClockPin, uint32_t ulBit
 	return value ;
 }
 
-extern void shiftOut( uint32_t ulDataPin, uint32_t ulClockPin, uint32_t ulBitOrder, uint32_t ulVal )
+void shiftOut( uint32_t ulDataPin, uint32_t ulClockPin, uint32_t ulBitOrder, uint32_t ulVal )
 {
 	uint8_t i ;
 
diff --git a/sam/platform.txt b/sam/platform.txt
index e928040..17c4344 100644
--- a/sam/platform.txt
+++ b/sam/platform.txt
@@ -6,12 +6,12 @@ name=Atmel SAM3
 compiler.path={runtime.ide.path}/hardware/tools/g++_arm_none_eabi/bin/
 #compiler.path=C:/arm-none-eabi-gcc-4_6/bin/
 compiler.c.cmd=arm-none-eabi-gcc
-compiler.c.flags=-c -g -Os -w -mlong-calls -ffunction-sections -fdata-sections -nostdlib --param max-inline-insns-single=500 -Dprintf=iprintf
+compiler.c.flags=-c -g -Os -w -ffunction-sections -fdata-sections -nostdlib --param max-inline-insns-single=500 -Dprintf=iprintf
 compiler.c.elf.cmd=arm-none-eabi-gcc
 compiler.c.elf.flags=-Os -Wl,--gc-sections
 compiler.S.flags=-c -g -assembler-with-cpp
 compiler.cpp.cmd=arm-none-eabi-g++
-compiler.cpp.flags=-c -g -Os -w -mlong-calls -ffunction-sections -fdata-sections -nostdlib --param max-inline-insns-single=500 -fno-rtti -fno-exceptions -Dprintf=iprintf
+compiler.cpp.flags=-c -g -Os -w -ffunction-sections -fdata-sections -nostdlib --param max-inline-insns-single=500 -fno-rtti -fno-exceptions -Dprintf=iprintf
 compiler.ar.cmd=arm-none-eabi-ar
 compiler.ar.flags=rcs
 compiler.objcopy.cmd=arm-none-eabi-objcopy
@@ -21,32 +21,35 @@ compiler.elf2hex.cmd=arm-none-eabi-objcopy
 compiler.ldflags=
 compiler.size.cmd=arm-none-eabi-size
 compiler.define=-DARDUINO=
+# this can be overriden in boards.txt
+build.extra_flags=
 
-compiler.libsam.c.flags=-I{build.system.path}/libsam -I{build.system.path}/CMSIS/CMSIS/Include/ -I{build.system.path}/CMSIS/Device/ATMEL/
+
+compiler.libsam.c.flags="-I{build.system.path}/libsam" "-I{build.system.path}/CMSIS/CMSIS/Include/" "-I{build.system.path}/CMSIS/Device/ATMEL/"
 
 # SAM3 compile patterns
 # ---------------------
 
 ## Compile c files
-recipe.c.o.pattern={compiler.path}{compiler.c.cmd} {compiler.c.flags} -mcpu={build.mcu} -DF_CPU={build.f_cpu} -D{software}={runtime.ide.version} {build.extra_flags} {compiler.libsam.c.flags} {includes} {source_file} -o {object_file}
+recipe.c.o.pattern="{compiler.path}{compiler.c.cmd}" {compiler.c.flags} -mcpu={build.mcu} -DF_CPU={build.f_cpu} -D{software}={runtime.ide.version} {build.extra_flags} {compiler.libsam.c.flags} {includes} "{source_file}" -o "{object_file}"
 
 ## Compile c++ files
-recipe.cpp.o.pattern={compiler.path}{compiler.cpp.cmd} {compiler.cpp.flags} -mcpu={build.mcu} -DF_CPU={build.f_cpu} -D{software}={runtime.ide.version} {build.extra_flags} {compiler.libsam.c.flags} {includes} {source_file} -o {object_file}
+recipe.cpp.o.pattern="{compiler.path}{compiler.cpp.cmd}" {compiler.cpp.flags} -mcpu={build.mcu} -DF_CPU={build.f_cpu} -D{software}={runtime.ide.version} {build.extra_flags} {compiler.libsam.c.flags} {includes} "{source_file}" -o "{object_file}"
 
 ## Create archives
-recipe.ar.pattern={compiler.path}{compiler.ar.cmd} {compiler.ar.flags} {build.path}/{archive_file} {object_file}
+recipe.ar.pattern="{compiler.path}{compiler.ar.cmd}" {compiler.ar.flags} "{build.path}/{archive_file}" "{object_file}"
 
 ## Combine gc-sections, archives, and objects
-recipe.c.combine.pattern={compiler.path}{compiler.c.elf.cmd} {compiler.c.elf.flags} -mcpu={build.mcu} -T{build.variant.path}/{build.ldscript} -Wl,-Map,{build.path}/{build.project_name}.map -o {build.path}/{build.project_name}.elf -L{build.path} -lm -lgcc -mthumb -Wl,--cref -Wl,--check-sections -Wl,--gc-sections -Wl,--entry=Reset_Handler -Wl,--unresolved-symbols=report-all -Wl,--warn-common -Wl,--warn-section-align -Wl,--warn-unresolved-symbols -Wl,--start-group {object_files} {build.variant.path}/{build.variant_system_lib} {build.path}/{archive_file} -Wl,--end-group
+recipe.c.combine.pattern="{compiler.path}{compiler.c.elf.cmd}" {compiler.c.elf.flags} -mcpu={build.mcu} "-T{build.variant.path}/{build.ldscript}" "-Wl,-Map,{build.path}/{build.project_name}.map" -o "{build.path}/{build.project_name}.elf" "-L{build.path}" -lm -lgcc -mthumb -Wl,--cref -Wl,--check-sections -Wl,--gc-sections -Wl,--entry=Reset_Handler -Wl,--unresolved-symbols=report-all -Wl,--warn-common -Wl,--warn-section-align -Wl,--warn-unresolved-symbols -Wl,--start-group "{build.path}/syscalls_sam3.c.o" {object_files} "{build.variant.path}/{build.variant_system_lib}" "{build.path}/{archive_file}" -Wl,--end-group
 
 ## Create eeprom
 recipe.objcopy.eep.pattern=
 
 ## Create hex
-recipe.objcopy.hex.pattern={compiler.path}{compiler.elf2hex.cmd} {compiler.elf2hex.flags} {build.path}/{build.project_name}.elf {build.path}/{build.project_name}.bin
+recipe.objcopy.hex.pattern="{compiler.path}{compiler.elf2hex.cmd}" {compiler.elf2hex.flags} "{build.path}/{build.project_name}.elf" "{build.path}/{build.project_name}.bin"
 
 ## Compute size
-recipe.size.pattern={compiler.path}{compiler.size.cmd} -A {build.path}/{build.project_name}.elf
+recipe.size.pattern="{compiler.path}{compiler.size.cmd}" -A "{build.path}/{build.project_name}.elf"
 recipe.size.regex=\.text\s+([0-9]+).*
 
 
@@ -59,7 +62,7 @@ tools.bossac.path={runtime.ide.path}/hardware/tools
 
 tools.bossac.upload.params.verbose=-i -d
 tools.bossac.upload.params.quiet=
-tools.bossac.upload.pattern={path}/{cmd} {upload.verbose} --port={serial.port.file} -e -w -v -b {build.path}/{build.project_name}.bin
+tools.bossac.upload.pattern="{path}/{cmd}" {upload.verbose} --port={serial.port.file} -e -w -v -b "{build.path}/{build.project_name}.bin"
 
 # specialized tool for adk2 to twiddle the erase line before running bossac
 tools.adk2install.cmd=adk2install